Transcript: ENST00000422050.1 BBIP1-002

Description

BBSome interacting protein 1 [Source:HGNC Symbol;Acc:28093]

Gene Synonyms

BBIP10, NCRNA00081, bA348N5.3

Location

Chromosome 10: 112,666,237-112,678,925 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 5313 variant alleles and maps to 182 oligo probes.

Gene

This transcript is a product of gene ENSG00000214413.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000454061.1	BBIP1-004	812	103aa	ENSP00000433157.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55728	A8MTZ0	NM_001195304.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000448814.1	BBIP1-001	2119	92aa	ENSP00000436622.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55727	A8MTZ0	NM_001195306.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000447005.1	BBIP1-003	727	70aa	ENSP00000432849.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58094	A8MTZ0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000605742.1	BBIP1-010	569	92aa	ENSP00000474675.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55727	A8MTZ0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000423273.1	BBIP1-007	492	67aa	ENSP00000432274.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55726	A8MTZ0	NM_001195307.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000436562.1	BBIP1-008	383	70aa	ENSP00000431936.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58094	A8MTZ0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000398289.2	BBIP1-005	616	45aa	ENSP00000435795.1	Nonsense mediated decay		E9PIK7	-	-
ENST00000605265.1	BBIP1-009	4712	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000422050.1	BBIP1-002	1498	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000431847.1	BBIP1-006	296	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 1,498 bps,

Version

ENST00000422050.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000050348 (version 2)

Favourite species

All species

Recent locations

Transcript: ENST00000422050.1 BBIP1-002

Summary