Transcript: ENST00000592014.1 PRCD-003

Description

progressive rod-cone degeneration [Source:HGNC Symbol;Acc:32528]

Gene Synonyms

RP36

Location

Chromosome 17: 74,536,115-74,539,920 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 2 domains and features, is associated with 1912 variant alleles and maps to 176 oligo probes.

Gene

This transcript is a product of gene ENSG00000214140.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000586148.1	PRCD-008	630	54aa	ENSP00000465932.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42382	Q00LT1	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000592014.1	PRCD-003	462	54aa	ENSP00000467661.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42382	Q00LT1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000592432.1	PRCD-005	3372	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000397633.3	PRCD-001	1862	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000591317.1	PRCD-006	1341	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000465808.3	PRCD-002	822	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000587289.1	PRCD-011	804	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000590555.1	PRCD-007	673	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000587063.1	PRCD-013	553	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000593023.1	PRCD-012	538	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000592340.1	PRCD-010	522	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000587813.1	PRCD-009	504	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000397630.3	PRCD-004	1820	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 3, Transcript length: 462 bps, Translation length: 54 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q00LT1

CCDS

This transcript is a member of the Human CCDS set: CCDS42382

Version

ENST00000592014.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000450597 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000592014.1 PRCD-003

Summary