Transcript: ENST00000464010.1 LYRM4-006

Description

LYR motif containing 4 [Source:HGNC Symbol;Acc:21365]

Gene Synonyms

C6orf149, CGI-203, ISD11

Location

Chromosome 6: 5,108,657-5,260,966 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 3 domains and features, is associated with 65657 variant alleles and maps to 347 oligo probes.

Gene

This transcript is a product of gene ENSG00000214113.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000500576.2	LYRM4-201	794	130aa	ENSP00000443900.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54962	F5H189	NM_001164840.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000330636.4	LYRM4-001	7312	91aa	ENSP00000418787.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4493	Q9HD34	NM_020408.5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000464010.1	LYRM4-006	1401	96aa	ENSP00000420026.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54961	C9JRX8	NM_001164841.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000468929.1	LYRM4-004	1168	40aa	ENSP00000418321.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J799	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000480566.1	LYRM4-005	941	70aa	ENSP00000419928.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JY28	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000463032.1	LYRM4-007	1489	74aa	ENSP00000417885.1	Nonsense mediated decay		H7C4Q5	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000606472.1	LYRM4-008	1005	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000458438.2	LYRM4-003	941	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000455814.2	LYRM4-002	450	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 1,401 bps, Translation length: 96 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS54961

Version

ENST00000464010.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000353484 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000464010.1 LYRM4-006

Summary