Transcript: ENST00000523259.1 SRA1-003

Description

steroid receptor RNA activator 1 [Source:HGNC Symbol;Acc:11281]

Gene Synonyms

SRA, SRAP, STRAA1, pp7684

Location

Chromosome 5: 139,930,119-139,937,031 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 3404 variant alleles and maps to 424 oligo probes.

Gene

This transcript is a product of gene ENSG00000213523.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000336283.6	SRA1-001	2165	236aa	ENSP00000337513.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34245	Q9HD15	NM_001035235.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000602657.1	SRA1-006	461	75aa	ENSP00000473378.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000520427.1	SRA1-004	978	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000523259.1	SRA1-003	1802	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000602775.1	SRA1-002	1466	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000602875.1	SRA1-005	769	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 1,802 bps,

Version

ENST00000523259.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000374262 (version 3)

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Transcript: ENST00000523259.1 SRA1-003

Summary