Transcript: ENST00000336283.6 SRA1-001

Description

steroid receptor RNA activator 1 [Source:HGNC Symbol;Acc:11281]

Gene Synonyms

SRA, SRAP, STRAA1, pp7684

Location

Chromosome 5: 139,929,653-139,937,895 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 5 domains and features, is associated with 4050 variant alleles and maps to 568 oligo probes.

Gene

This transcript is a product of gene ENSG00000213523.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000336283.6	SRA1-001	2165	236aa	ENSP00000337513.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34245	Q9HD15	NM_001035235.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000602657.1	SRA1-006	461	75aa	ENSP00000473378.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000520427.1	SRA1-004	978	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000523259.1	SRA1-003	1802	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000602775.1	SRA1-002	1466	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000602875.1	SRA1-005	769	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 2,165 bps, Translation length: 236 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9HD15

CCDS

This transcript is a member of the Human CCDS set: CCDS34245

Version

ENST00000336283.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000374260 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000336283.6 SRA1-001

Summary