Transcript: ENST00000489752.1 LNP1-004

Description

leukemia NUP98 fusion partner 1 [Source:HGNC Symbol;Acc:28014]

Gene Synonyms

NP3

Location

About this transcript

This transcript has 4 exons, is annotated with 3 domains and features, is associated with 22018 variant alleles and maps to 261 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000383693.3	LNP1-001	2210	178aa	ENSP00000373191.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43120	A1A4G5 B3KPG3	NM_001085451.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000489752.1	LNP1-004	1813	191aa	ENSP00000417985.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J587	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000466996.1	LNP1-002	1723	56aa	ENSP00000419213.1	Nonsense mediated decay		F8WF60	-	-

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 1,813 bps, Translation length: 191 residues

Version

ENST00000489752.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000353235 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.