Transcript: ENST00000480977.2 LGR4-003

Description

leucine-rich repeat containing G protein-coupled receptor 4 [Source:HGNC Symbol;Acc:13299]

Gene Synonyms

BNMD17, GPR48

Location

Chromosome 11: 27,406,793-27,493,861 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 17 domains and features, is associated with 34148 variant alleles and maps to 68 oligo probes.

Gene

This transcript is a product of gene ENSG00000205213.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000379214.4	LGR4-001	5206	951aa	ENSP00000368516.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31449	Q59ER8 Q9BXB1	NM_018490.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000389858.4	LGR4-002	5163	927aa	ENSP00000374508.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9BXB1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000480977.2	LGR4-003	492	158aa	ENSP00000431650.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PK51	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000489910.1	LGR4-005	703	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000530658.1	LGR4-007	553	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000527773.1	LGR4-006	420	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 492 bps, Translation length: 158 residues

Version

ENST00000480977.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000257469 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000480977.2 LGR4-003

Summary