Transcript: ENST00000562410.1 TMEM231-002

Description

transmembrane protein 231 [Source:HGNC Symbol;Acc:37234]

Gene Synonyms

ALYE870, FLJ22167, JBTS20, MKS11, PRO1886

Location

Chromosome 16: 75,572,034-75,590,166 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 5 domains and features, is associated with 9582 variant alleles and maps to 489 oligo probes.

Gene

This transcript is a product of gene ENSG00000205084.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000568377.1	TMEM231-005	2920	345aa	ENSP00000476267.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z5I3	NM_001077416.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000258173.6	TMEM231-001	2905	316aa	ENSP00000258173.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45530	B7Z5I3 Q9H6L2	NM_001077418.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000565067.1	TMEM231-004	1078	268aa	ENSP00000457254.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BTN6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000562410.1	TMEM231-002	2991	106aa	ENSP00000454582.1	Nonsense mediated decay		H3BMW7	-	-
ENST00000570006.1	TMEM231-006	922	193aa	ENSP00000455520.1	Nonsense mediated decay		H3BPY4	-	-
ENST00000569294.1	TMEM231-009	568	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000564576.1	TMEM231-010	556	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000564318.1	TMEM231-007	2520	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000561809.1	TMEM231-008	560	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 3, Transcript length: 2,991 bps, Translation length: 106 residues

Version

ENST00000562410.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000435482 (version 1)

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Transcript: ENST00000562410.1 TMEM231-002

Summary