Transcript: ENST00000467742.1 TRIM27-006

Description

tripartite motif containing 27 [Source:HGNC Symbol;Acc:9975]

Gene Synonyms

RFP, RNF76

Location

Chromosome 6: 28,872,251-28,875,361 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 1203 variant alleles and maps to 821 oligo probes.

Gene

This transcript is a product of gene ENSG00000204713.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000377199.3	TRIM27-001	2967	513aa	ENSP00000366404.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4654	P14373 Q9NZT8	NM_006510.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000377194.3	TRIM27-002	2686	358aa	ENSP00000366399.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		P14373 Q9NZT8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000414543.1	TRIM27-003	1813	248aa	ENSP00000400058.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000498117.1	TRIM27-007	728	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000496091.1	TRIM27-005	687	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000467742.1	TRIM27-006	541	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000481474.1	TRIM27-004	7006	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 541 bps,

Version

ENST00000467742.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000192608 (version 1)

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Transcript: ENST00000467742.1 TRIM27-006

Summary