Transcript: ENST00000507848.1 FAM153C-002

Description

family with sequence similarity 153, member C [Source:HGNC Symbol;Acc:33936]

Gene Synonyms

NY-REN-7-like

Location

Chromosome 5: 177,433,973-177,476,088 forward strand.

About this transcript

This transcript has 12 exons, is annotated with 6 domains and features, is associated with 18317 variant alleles and maps to 783 oligo probes.

Gene

This transcript is a product of gene ENSG00000204677.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq	Flags
ENST00000507848.1	FAM153C-002	1071	144aa	ENSP00000424623.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D6RA46 Q494X1	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000398106.2	FAM153C-001	1510	114aa	ENSP00000381177.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D6RA46 Q494X1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000511189.1	FAM153C-005	926	173aa	ENSP00000426621.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D6RA46 D6RF56	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000511856.1	FAM153C-004	597	176aa	ENSP00000422293.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D6RA46 D6RCA3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000504530.1	FAM153C-012	539	39aa	ENSP00000423403.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D6RA46	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000511511.1	FAM153C-006	1098	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	-
ENST00000511819.1	FAM153C-007	632	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	-
ENST00000506096.1	FAM153C-008	457	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	-
ENST00000515878.1	FAM153C-009	385	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	-
ENST00000505394.1	FAM153C-011	373	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	-
ENST00000508839.1	FAM153C-010	289	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	-
ENST00000505582.1	FAM153C-003	558	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-

Summary

Statistics

Exons: 12, Coding exons: 9, Transcript length: 1,071 bps, Translation length: 144 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q494X1

Version

ENST00000507848.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000373556 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000507848.1 FAM153C-002

Summary