Transcript: ENST00000488372.1 MBD5-007

Description

methyl-CpG binding domain protein 5 [Source:HGNC Symbol;Acc:20444]

Gene Synonyms

CDC37, FLJ11113, KIAA1461, MRD1

Location

Chromosome 2: 148,778,580-149,216,066 forward strand.

About this transcript

This transcript has 4 exons, is associated with 185507 variant alleles and maps to 144 oligo probes.

Gene

This transcript is a product of gene ENSG00000204406.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000407073.1	MBD5-001	5992	1494aa	ENSP00000386049.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33302	Q9P267	NM_018328.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000416015.1	MBD5-005	8489	1064aa	ENSP00000393168.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000404807.1	MBD5-004	5823	1727aa	ENSP00000384672.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PHH0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000478804.1	MBD5-002	592	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000488372.1	MBD5-007	548	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000496158.1	MBD5-006	544	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000478190.1	MBD5-010	540	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000473478.1	MBD5-008	482	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000470063.1	MBD5-011	315	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000469438.1	MBD5-009	252	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000496893.1	MBD5-003	2802	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 548 bps,

Version

ENST00000488372.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000318117 (version 1)

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Transcript: ENST00000488372.1 MBD5-007

Summary