Transcript: ENST00000374156.4 C10orf128-001

Description

chromosome 10 open reading frame 128 [Source:HGNC Symbol;Acc:27274]

Gene Synonyms

Em:AC084727.5

Location

Chromosome 10: 50,362,773-50,386,446 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 2 domains and features, is associated with 11889 variant alleles and maps to 316 oligo probes.

Gene

This transcript is a product of gene ENSG00000204161.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000474718.1	C10orf128-004	614	105aa	ENSP00000417246.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41519	Q5T292	NM_001010863.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000374148.1	C10orf128-002	1756	159aa	ENSP00000363263.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T292	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000374153.2	C10orf128-003	1569	129aa	ENSP00000363268.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T292	NM_001288740.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000453436.1	C10orf128-005	730	115aa	ENSP00000395067.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T290	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000374151.3	C10orf128-201	562	172aa	ENSP00000363266.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T292	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000374156.4	C10orf128-001	2070	143aa	ENSP00000432859.1	Nonsense mediated decay		G3V182	-	-
ENST00000470884.1	C10orf128-006	588	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000488276.1	C10orf128-007	490	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 3, Transcript length: 2,070 bps, Translation length: 143 residues

Version

ENST00000374156.4

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000047975 (version 3)

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Transcript: ENST00000374156.4 C10orf128-001

Summary