Transcript: ENST00000374142.4 ZDHHC18-001

Description

zinc finger, DHHC-type containing 18 [Source:HGNC Symbol;Acc:20712]

Gene Synonyms

DHHC-18, DHHC18, DKFZp667O2416

Location

About this transcript

This transcript has 8 exons, is annotated with 11 domains and features, is associated with 13498 variant alleles and maps to 497 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000374142.4	ZDHHC18-001	5020	388aa	ENSP00000363257.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS30650	B4DQ84 E9PJS3 Q9NUE0	NM_032283.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000488397.3	ZDHHC18-004	1275	161aa	ENSP00000436203.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000374141.2	ZDHHC18-005	1002	253aa	ENSP00000363256.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DQ84 E9PJS3	-	-
ENST00000534643.1	ZDHHC18-006	597	158aa	ENSP00000435510.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PJS3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000478902.1	ZDHHC18-002	562	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 5,020 bps, Translation length: 388 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9NUE0

CCDS

This transcript is a member of the Human CCDS set: CCDS30650

Version

ENST00000374142.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000011706 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.