Transcript: ENST00000369605.4 SNHG5-001

Description

small nucleolar RNA host gene 5 (non-protein coding) [Source:HGNC Symbol;Acc:21026]

Gene Synonyms

C6orf160, LINC00044, MGC16362, NCRNA00044, RNU50, U50, U50', U50B, U50HG, bA33E24.2

Location

Chromosome 6: 86,386,725-86,388,420 reverse strand.

About this transcript

This transcript has 5 exons, is associated with 1023 variant alleles and maps to 531 oligo probes.

Gene

This transcript is a product of gene ENSG00000203875.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq	Flags
ENST00000420199.1	SNHG5-010	1002	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENST00000431043.1	SNHG5-009	998	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENST00000427501.1	SNHG5-005	680	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENST00000425170.1	SNHG5-008	489	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENST00000587692.1	SNHG5-012	1029	No protein	-	lincRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENST00000369605.4	SNHG5-001	981	No protein	-	lincRNA	-	-
ENST00000435947.1	SNHG5-003	696	No protein	-	lincRNA	-	-
ENST00000428833.1	SNHG5-004	641	No protein	-	lincRNA	-	-
ENST00000589187.1	SNHG5-011	568	No protein	-	lincRNA	-	-
ENST00000414002.1	SNHG5-002	430	No protein	-	lincRNA	-	-
ENST00000453754.1	SNHG5-006	401	No protein	-	lincRNA	-	-
ENST00000433843.1	SNHG5-007	388	No protein	-	lincRNA	-	-
ENST00000384338.1	SNHG5-202	75	No protein	-	Small RNA molecules that are found in the cell nucleolus and are involved in the post-transcriptional modification of other RNAs.snoRNA	NR_002743.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000364995.1	SNHG5-201	70	No protein	-	Small RNA molecules that are found in the cell nucleolus and are involved in the post-transcriptional modification of other RNAs.snoRNA	NR_003044.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 981 bps,

Version

ENST00000369605.4

Type

LincRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000041401 (version 2)

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Transcript: ENST00000369605.4 SNHG5-001

Summary