Transcript: ENST00000464757.1 COX20-004

Description

COX20 cytochrome C oxidase assembly factor [Source:HGNC Symbol;Acc:26970]

Gene Synonyms

FAM36A, FLJ43269

Location

About this transcript

This transcript has 3 exons, is associated with 1857 variant alleles and maps to 243 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000411948.2	COX20-001	2631	118aa	ENSP00000406327.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31080	B3KM21 Q5RI15	NM_198076.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000366528.3	COX20-005	568	130aa	ENSP00000355486.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5RI15	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000498262.1	COX20-002	2290	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000391839.2	COX20-003	1005	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000464757.1	COX20-004	2616	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 2,616 bps,

Version

ENST00000464757.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000097177 (version 1)