Transcript: ENST00000392634.4 INF2-001

Description

inverted formin, FH2 and WH2 domain containing [Source:HGNC Symbol;Acc:23791]

Gene Synonyms

C14orf151, C14orf173, CMTDIE, FSGS5, MGC13251, pp9484

Location

Chromosome 14: 105,155,974-105,185,940 forward strand.

About this transcript

This transcript has 23 exons, is annotated with 21 domains and features, is associated with 16129 variant alleles and maps to 790 oligo probes.

Gene

This transcript is a product of gene ENSG00000203485.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000392634.4	INF2-001	4672	1249aa	ENSP00000376410.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9989	Q27J81	NM_022489.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000330634.7	INF2-003	4648	1240aa	ENSP00000376406.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45173	Q27J81	NM_001031714.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000252527.8	INF2-010	3050	717aa	ENSP00000252527.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000398337.4	INF2-009	1689	234aa	ENSP00000381380.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41999	Q27J81	NM_032714.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000481338.1	INF2-005	1102	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000474229.1	INF2-006	947	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000480763.2	INF2-007	581	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000477497.1	INF2-008	545	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 23, Coding exons: 21, Transcript length: 4,672 bps, Translation length: 1,249 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q27J81

CCDS

This transcript is a member of the Human CCDS set: CCDS9989

Version

ENST00000392634.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000074371 (version 4)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000392634.4 INF2-001

Summary