Transcript: ENST00000554447.1 CIPC-007

Description

CLOCK-interacting pacemaker [Source:HGNC Symbol;Acc:20365]

Gene Synonyms

KIAA1737

Location

Chromosome 14: 77,565,456-77,579,915 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 2 domains and features, is associated with 5556 variant alleles and maps to 97 oligo probes.

Gene

This transcript is a product of gene ENSG00000198894.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000361786.2	CIPC-001	4486	399aa	ENSP00000355319.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9855	G3V3Y7 G3V405 G3V5J4 G3V5Y7 Q9C0C6	NM_033426.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000557115.1	CIPC-006	882	156aa	ENSP00000452589.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V3Y7 G3V405 G3V5J4 G3V5Y7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000555611.1	CIPC-004	599	103aa	ENSP00000450972.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V310	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000554447.1	CIPC-007	596	151aa	ENSP00000452380.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V3Y7 G3V405 G3V5J4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000554658.1	CIPC-005	584	134aa	ENSP00000451522.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V405	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000555200.1	CIPC-008	581	141aa	ENSP00000451493.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V3Y7 G3V405	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000555437.1	CIPC-002	566	61aa	ENSP00000451997.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V4V0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000556863.1	CIPC-003	538	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 596 bps, Translation length: 151 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000554447.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000414284 (version 1)

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Transcript: ENST00000554447.1 CIPC-007

Summary