Transcript: ENST00000361427.5 HMGN2-001

Description

high mobility group nucleosomal binding domain 2 [Source:HGNC Symbol;Acc:4986]

Gene Synonyms

HMG17

Location

Chromosome 1: 26,799,010-26,802,463 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 10 domains and features, is associated with 2331 variant alleles and maps to 491 oligo probes.

Gene

This transcript is a product of gene ENSG00000198830.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000361427.5	HMGN2-001	1191	90aa	ENSP00000355228.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS283	P05204	NM_005517.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000493418.1	HMGN2-008	1496	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000460563.1	HMGN2-004	1045	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000479815.1	HMGN2-003	1030	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000466194.1	HMGN2-009	952	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000467700.1	HMGN2-007	932	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000463817.1	HMGN2-006	853	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000464888.1	HMGN2-005	565	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000468388.1	HMGN2-002	320	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 1,191 bps, Translation length: 90 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P05204

CCDS

This transcript is a member of the Human CCDS set: CCDS283

Version

ENST00000361427.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000009901 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000361427.5 HMGN2-001

Summary