Transcript: ENST00000561271.1 CDC42BPB-003

Description

CDC42 binding protein kinase beta (DMPK-like) [Source:HGNC Symbol;Acc:1738]

Gene Synonyms

KIAA1124, MRCKB

Location

Chromosome 14: 103,452,847-103,470,616 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 8500 variant alleles and maps to 66 oligo probes.

Gene

This transcript is a product of gene ENSG00000198752.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000361246.2	CDC42BPB-001	6758	1711aa	ENSP00000355237.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9978	Q9Y5S2	NM_006035.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000559043.1	CDC42BPB-002	1999	666aa	ENSP00000453384.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q86TR8	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000558867.1	CDC42BPB-004	635	212aa	ENSP00000453311.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000559245.1	CDC42BPB-007	738	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000559790.1	CDC42BPB-008	713	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000560492.1	CDC42BPB-005	646	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000561271.1	CDC42BPB-003	572	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000558321.1	CDC42BPB-006	528	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 572 bps,

Version

ENST00000561271.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000415718 (version 1)

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Transcript: ENST00000561271.1 CDC42BPB-003

Summary