Transcript: ENST00000474228.1 SPRED2-003

Description

sprouty-related, EVH1 domain containing 2 [Source:HGNC Symbol;Acc:17722]

Gene Synonyms

FLJ21897, FLJ31917, Spred-2

Location

Chromosome 2: 65,543,868-65,593,886 reverse strand.

About this transcript

This transcript has 6 exons, is associated with 23158 variant alleles and maps to 172 oligo probes.

Gene

This transcript is a product of gene ENSG00000198369.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000356388.4	SPRED2-001	4097	418aa	ENSP00000348753.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33211	C9J623 Q7Z698	NM_181784.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000443619.2	SPRED2-008	1800	415aa	ENSP00000393697.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46308	Q7Z698	NM_001128210.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000452315.1	SPRED2-006	1365	432aa	ENSP00000390595.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JG63	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000421087.1	SPRED2-002	701	233aa	ENSP00000407627.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7C2T4	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000440972.1	SPRED2-007	555	116aa	ENSP00000406481.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J623	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000427238.1	SPRED2-005	467	47aa	ENSP00000393148.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000426832.1	SPRED2-004	498	103aa	ENSP00000414551.1	Nonsense mediated decay		H7C3Y6	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000474228.1	SPRED2-003	876	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 0, Transcript length: 876 bps,

Version

ENST00000474228.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000327634 (version 3)

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Transcript: ENST00000474228.1 SPRED2-003

Summary