Transcript: ENST00000374431.3 LPAR1-001

Description

lysophosphatidic acid receptor 1 [Source:HGNC Symbol;Acc:3166]

Gene Synonyms

EDG2, GPR26, Gpcr26, LPA1, Mrec1.3, VZG1, edg-2, rec.1.3, vzg-1

Location

Chromosome 9: 113,635,543-113,800,323 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 37 domains and features, is associated with 68322 variant alleles and maps to 562 oligo probes.

Gene

This transcript is a product of gene ENSG00000198121.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000374431.3	LPAR1-001	3637	364aa	ENSP00000363553.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6777	B1AP63 Q5VZX0 Q6GPG7 Q92633	NM_057159.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000541779.1	LPAR1-202	3255	365aa	ENSP00000445697.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DK36 Q6GPG7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000374430.2	LPAR1-002	2993	364aa	ENSP00000363552.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6777	B1AP63 Q5VZX0 Q6GPG7 Q92633	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000358883.4	LPAR1-003	2687	364aa	ENSP00000351755.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6777	B1AP63 Q5VZX0 Q6GPG7 Q92633	NM_001401.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000538760.1	LPAR1-201	1345	365aa	ENSP00000440201.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DQ18 Q6GPG7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000441240.1	LPAR1-004	1019	182aa	ENSP00000401810.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B1AP63	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 3, Transcript length: 3,637 bps, Translation length: 364 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q92633

CCDS

This transcript is a member of the Human CCDS set: CCDS6777

Version

ENST00000374431.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000053631 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000374431.3 LPAR1-001

Summary