Transcript: ENST00000359314.5 CD2AP-001

Description

CD2-associated protein [Source:HGNC Symbol;Acc:14258]

Gene Synonyms

CMS

Location

About this transcript

This transcript has 18 exons, is annotated with 28 domains and features, is associated with 64951 variant alleles and maps to 709 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000359314.5	CD2AP-001	5412	639aa	ENSP00000352264.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34472	Q9Y5K6	NM_012120.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000486693.1	CD2AP-005	548	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000479857.1	CD2AP-002	404	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000463175.1	CD2AP-004	707	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000477159.1	CD2AP-003	611	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 18, Coding exons: 18, Transcript length: 5,412 bps, Translation length: 639 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9Y5K6

CCDS

This transcript is a member of the Human CCDS set: CCDS34472

Version

ENST00000359314.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000040817 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.