Transcript: ENST00000478969.1 KEL-009

Description

Kell blood group, metallo-endopeptidase [Source:HGNC Symbol;Acc:6308]

Gene Synonyms

CD238, ECE3

Location

Chromosome 7: 142,639,546-142,640,241 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 443 variant alleles and maps to 167 oligo probes.

Gene

This transcript is a product of gene ENSG00000197993.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000355265.2	KEL-001	2812	732aa	ENSP00000347409.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34766	A3F6J8 A8YPS5 E7ETW3 P23276 Q06AK5 Q09GN6 Q0KH83 Q0KH84 Q0KH85 Q0KH86 Q0KH87 Q0KH89 Q0KH93 Q0KH97	NM_000420.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000467543.1	KEL-003	786	204aa	ENSP00000420011.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A3F6J8 E7ETW3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000476829.1	KEL-005	649	184aa	ENSP00000419889.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A3F6J8 E9PHG0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000460479.1	KEL-004	556	186aa	ENSP00000418886.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A3F6J8	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000479768.2	KEL-002	1856	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000494148.1	KEL-006	417	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000470850.1	KEL-008	705	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000465697.1	KEL-007	501	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000478969.1	KEL-009	351	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 351 bps,

Version

ENST00000478969.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000350859 (version 1)

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Transcript: ENST00000478969.1 KEL-009

Summary