Transcript: ENST00000354817.3 FAR1-001

Description

fatty acyl CoA reductase 1 [Source:HGNC Symbol;Acc:26222]

Gene Synonyms

FLJ22728, MLSTD2, SDR10E1

Location

Chromosome 11: 13,690,217-13,753,893 forward strand.

About this transcript

This transcript has 12 exons, is annotated with 9 domains and features, is associated with 26861 variant alleles and maps to 674 oligo probes.

Gene

This transcript is a product of gene ENSG00000197601.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000354817.3	FAR1-001	5264	515aa	ENSP00000346874.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7813	E9PPB8 Q8WVX9	NM_032228.5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000532502.1	FAR1-002	5820	139aa	ENSP00000434624.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PPB8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000532701.1	FAR1-006	1109	335aa	ENSP00000437111.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PNW8 Q9H600	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000527202.1	FAR1-005	603	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000524933.1	FAR1-004	818	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000532769.1	FAR1-003	450	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 12, Coding exons: 11, Transcript length: 5,264 bps, Translation length: 515 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8WVX9

CCDS

This transcript is a member of the Human CCDS set: CCDS7813

Version

ENST00000354817.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000385990 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000354817.3 FAR1-001

Summary