Transcript: ENST00000371172.3 OPALIN-001

Description

oligodendrocytic myelin paranodal and inner loop protein [Source:HGNC Symbol;Acc:20707]

Gene Synonyms

HTMP10, TMEM10, TMP10

Location

Chromosome 10: 98,102,973-98,119,059 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 3 domains and features, is associated with 6622 variant alleles and maps to 401 oligo probes.

Gene

This transcript is a product of gene ENSG00000197430.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000371172.3	OPALIN-001	3557	141aa	ENSP00000360214.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7448	Q96PE5	NM_033207.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000419479.1	OPALIN-203	3629	131aa	ENSP00000398025.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44466	Q96PE5	NM_001284324.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000393871.1	OPALIN-202	3521	118aa	ENSP00000377449.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41556	Q96PE5	NM_001040102.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000393870.2	OPALIN-201	1411	130aa	ENSP00000377448.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS60602	A8MX69	NM_001284320.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000536387.1	OPALIN-204	1047	131aa	ENSP00000445125.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44466	Q96PE5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 3,557 bps, Translation length: 141 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96PE5

CCDS

This transcript is a member of the Human CCDS set: CCDS7448

Version

ENST00000371172.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000049606 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000371172.3 OPALIN-001

Summary