Transcript: ENST00000553002.1 LRP10-005

Description

low density lipoprotein receptor-related protein 10 [Source:HGNC Symbol;Acc:14553]

Gene Synonyms

DKFZP564C1940, LRP9, MGC8675, MST087, MSTP087

Location

About this transcript

This transcript has 3 exons, is associated with 1248 variant alleles and maps to 93 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000359591.4	LRP10-001	6886	713aa	ENSP00000352601.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9578	Q5I0F9 Q66K21 Q6IAK3 Q7Z4F1	NM_014045.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000551466.1	LRP10-003	2566	458aa	ENSP00000447977.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000546834.1	LRP10-004	1780	556aa	ENSP00000447559.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q7Z4F1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000470660.1	LRP10-002	486	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000553002.1	LRP10-005	1065	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 1,065 bps,

Version

ENST00000553002.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000408288 (version 1)