Transcript: ENST00000523499.1 GTF2E2-004

Description

general transcription factor IIE, polypeptide 2, beta 34kDa [Source:HGNC Symbol;Acc:4651]

Gene Synonyms

FE, TF2E2, TFIIE-B

Location

About this transcript

This transcript has 8 exons, is annotated with 3 domains and features, is associated with 22810 variant alleles and maps to 178 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000355904.4	GTF2E2-001	1762	291aa	ENSP00000348168.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6078	E5RH41 E5RIW4 P29084	NM_002095.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000518599.1	GTF2E2-003	737	198aa	ENSP00000429921.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RH41 E5RIW4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000518445.1	GTF2E2-002	426	126aa	ENSP00000429312.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RIW4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000523499.1	GTF2E2-004	768	73aa	ENSP00000428981.1	Nonsense mediated decay		E5RK24	-	-
ENST00000522833.1	GTF2E2-005	752	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 3, Transcript length: 768 bps, Translation length: 73 residues

Version

ENST00000523499.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000376481 (version 1)