Transcript: ENST00000329342.5 MAGEA6-001

Description

melanoma antigen family A, 6 [Source:HGNC Symbol;Acc:6804]

Gene Synonyms

CT1.6, MAGE-3b, MAGE3B, MAGE6

Location

About this transcript

This transcript has 3 exons, is annotated with 6 domains and features, is associated with 271 variant alleles and maps to 619 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000329342.5	MAGEA6-001	1740	314aa	ENSP00000329199.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14708	B9A060 E7ETG4 E7EUF2 P43360	NM_005363.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000457643.1	MAGEA6-003	921	235aa	ENSP00000401806.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B9A060 E7ETG4 E7EUF2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000412733.1	MAGEA6-002	862	201aa	ENSP00000403303.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B9A060 E7EUF2	NM_175868.1	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 3, Coding exons: 1, Transcript length: 1,740 bps, Translation length: 314 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P43360

CCDS

This transcript is a member of the Human CCDS set: CCDS14708

Version

ENST00000329342.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000058747 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.