Transcript: ENST00000531616.1 ARHGEF12-010

Description

Rho guanine nucleotide exchange factor (GEF) 12 [Source:HGNC Symbol;Acc:14193]

Gene Synonyms

KIAA0382, LARG, PRO2792

Location

Chromosome 11: 120,333,258-120,343,836 forward strand.

About this transcript

This transcript has 4 exons, is associated with 4242 variant alleles and maps to 86 oligo probes.

Gene

This transcript is a product of gene ENSG00000196914.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000397843.2	ARHGEF12-001	9660	1544aa	ENSP00000380942.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41727	E9PMR6 Q9NZN5	NM_015313.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000356641.3	ARHGEF12-201	9444	1525aa	ENSP00000349056.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55794	B4E2K6 E9PMR6 Q9NZN5	NM_001198665.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000532993.1	ARHGEF12-003	8753	1441aa	ENSP00000432984.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PMR6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000530388.1	ARHGEF12-005	4309	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000529970.1	ARHGEF12-006	3786	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000531616.1	ARHGEF12-010	3108	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000525222.1	ARHGEF12-012	2795	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000528225.1	ARHGEF12-008	2647	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000530747.1	ARHGEF12-013	1930	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000526067.1	ARHGEF12-014	1323	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000532823.1	ARHGEF12-011	1099	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000525960.1	ARHGEF12-009	468	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000528681.1	ARHGEF12-007	433	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 3,108 bps,

Version

ENST00000531616.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000388061 (version 1)

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000531616.1 ARHGEF12-010

Summary