Transcript: ENST00000523004.1 GM2A-002

Description

GM2 ganglioside activator [Source:HGNC Symbol;Acc:4367]

Gene Synonyms

GM2-AP, SAP-3

Location

About this transcript

This transcript has 2 exons, is annotated with 4 domains and features, is associated with 2996 variant alleles and maps to 373 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000357164.3	GM2A-001	3896	193aa	ENSP00000349687.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4313	P17900	NM_001167607.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000523004.1	GM2A-002	643	104aa	ENSP00000430541.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000523466.1	GM2A-004	553	146aa	ENSP00000429100.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RJD0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 643 bps, Translation length: 104 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000523004.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000373831 (version 1)