Transcript: ENST00000356609.2 SLC30A10-001

Description

solute carrier family 30, member 10 [Source:HGNC Symbol;Acc:25355]

Gene Synonyms

DKFZp547M236, HMDPC, ZNT10, ZNT8, ZRC1, ZnT-10

Location

Chromosome 1: 220,086,848-220,101,993 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 12 domains and features, is associated with 7347 variant alleles and maps to 378 oligo probes.

Gene

This transcript is a product of gene ENSG00000196660.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000366926.3	SLC30A10-004	1915	485aa	ENSP00000355893.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31026	B3KR19 Q6XR72	NM_018713.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000536446.1	SLC30A10-201	898	240aa	ENSP00000439489.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6XR72	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000536992.1	SLC30A10-202	883	223aa	ENSP00000440627.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6XR72	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000356609.2	SLC30A10-001	3650	223aa	ENSP00000349018.2	Nonsense mediated decay		Q6XR72	-	-
ENST00000484079.1	SLC30A10-003	2461	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000484239.1	SLC30A10-002	1902	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 2, Transcript length: 3,650 bps, Translation length: 223 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6XR72

Version

ENST00000356609.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000091136 (version 2)

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Transcript: ENST00000356609.2 SLC30A10-001

Summary