Transcript: ENST00000405086.2 GTF2IRD2-001

Description

GTF2I repeat domain containing 2 [Source:HGNC Symbol;Acc:30775]

Gene Synonyms

FLJ37938, FP630, GTF2IRD2 alpha, GTF2IRD2A

Location

Chromosome 7: 74,210,483-74,267,847 reverse strand.

About this transcript

This transcript has 16 exons, is annotated with 13 domains and features, is associated with 18277 variant alleles and maps to 1254 oligo probes.

Gene

This transcript is a product of gene ENSG00000196275.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000405086.2	GTF2IRD2-001	3558	949aa	ENSP00000385491.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5576	Q86UP8	NM_173537.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000451013.2	GTF2IRD2-201	2242	496aa	ENSP00000406723.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q86UP8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000361071.5	GTF2IRD2-002	1931	437aa	ENSP00000354362.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G8JLD9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000453619.2	GTF2IRD2-202	1869	226aa	ENSP00000402105.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000417115.2	GTF2IRD2-003	589	108aa	ENSP00000388050.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS64682	Q86UP8	NM_001281447.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000484624.1	GTF2IRD2-006	2047	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000457594.2	GTF2IRD2-004	1805	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 16, Coding exons: 15, Transcript length: 3,558 bps, Translation length: 949 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q86UP8

CCDS

This transcript is a member of the Human CCDS set: CCDS5576

Version

ENST00000405086.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000252712 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000405086.2 GTF2IRD2-001

Summary