Transcript: ENST00000444545.1 TMEM194B-003

Description

transmembrane protein 194B [Source:HGNC Symbol;Acc:33700]

Location

About this transcript

This transcript has 6 exons, is associated with 3974 variant alleles and maps to 170 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000409150.3	TMEM194B-001	6168	417aa	ENSP00000386292.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46476	A6NFY4 C9J4F2	NM_001142645.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000421038.1	TMEM194B-005	432	24aa	ENSP00000410306.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J4F2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000414176.1	TMEM194B-004	1119	138aa	ENSP00000404283.1	Nonsense mediated decay		B4DYG6 C9J4F2	-	-
ENST00000444545.1	TMEM194B-003	643	35aa	ENSP00000403867.1	Nonsense mediated decay		H7C232	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000343105.5	TMEM194B-002	549	85aa	ENSP00000340087.5	Nonsense mediated decay		F8VWJ7 H7C232	-	-
ENST00000492292.1	TMEM194B-006	622	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 2, Transcript length: 643 bps, Translation length: 35 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000444545.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000335301 (version 1)