Transcript: ENST00000416699.1 RRP7A-003

Description

ribosomal RNA processing 7 homolog A (S. cerevisiae) [Source:HGNC Symbol;Acc:24286]

Gene Synonyms

BK126B4.3, CGI-96

Location

About this transcript

This transcript has 6 exons, is associated with 3222 variant alleles and maps to 193 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000323013.6	RRP7A-001	3801	280aa	ENSP00000321449.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14036	Q9Y3A4	NM_015703.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000416699.1	RRP7A-003	687	53aa	ENSP00000405547.1	Nonsense mediated decay		F8WAT7	-	-
ENST00000483303.1	RRP7A-002	580	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 2, Transcript length: 687 bps, Translation length: 53 residues

Version

ENST00000416699.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000320453 (version 1)