Transcript: ENST00000415915.1 FSIP2-004

Description

fibrous sheath interacting protein 2 [Source:HGNC Symbol;Acc:21675]

Gene Synonyms

FLJ34780

Location

Chromosome 2: 186,659,345-186,698,016 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 6 domains and features, is associated with 17159 variant alleles and maps to 251 oligo probes.

Gene

This transcript is a product of gene ENSG00000188738.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000343098.5	FSIP2-201	21054	6996aa	ENSP00000344403.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54426	J3QTJ6	NM_173651.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000424728.1	FSIP2-001	20788	6907aa	ENSP00000401306.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5CZC0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000546113.1	FSIP2-202	2726	130aa	ENSP00000439530.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8NAU3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000415915.1	FSIP2-004	3869	973aa	ENSP00000390251.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000429412.1	FSIP2-003	2726	136aa	ENSP00000395888.1	Nonsense mediated decay		H0Y515 Q8NAU3	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000465275.1	FSIP2-007	348	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000469367.1	FSIP2-008	858	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 2, Transcript length: 3,869 bps, Translation length: 973 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000415915.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000334512 (version 3)

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Transcript: ENST00000415915.1 FSIP2-004

Summary