Transcript: ENST00000389060.4 IDO2-004

Description

indoleamine 2,3-dioxygenase 2 [Source:HGNC Symbol;Acc:27269]

Gene Synonyms

INDOL1

Location

Chromosome 8: 39,806,685-39,873,124 forward strand.

About this transcript

This transcript has 10 exons, is annotated with 3 domains and features, is associated with 32927 variant alleles and maps to 212 oligo probes.

Gene

This transcript is a product of gene ENSG00000188676.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq	Flags
ENST00000502986.2	IDO2-201	2294	420aa	ENSP00000443432.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F5H5G0	NM_194294.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000389060.4	IDO2-004	1227	407aa	ENSP00000426447.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6ZQW0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000343295.4	IDO2-001	4264	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	-
ENST00000418094.1	IDO2-003	1640	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	-

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 1,227 bps, Translation length: 407 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6ZQW0

Version

ENST00000389060.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Stop codons

This transcript has a variant, rs4503083, that causes a stop codon to be gained in at least 10% of HapMap or 1000 Genome population(s) CSHL-HAPMAP:HapMap-JPT, CSHL-HAPMAP:HapMap-CEU, CSHL-HAPMAP:HAPMAP-MEX, CSHL-HAPMAP:HapMap-HCB, CSHL-HAPMAP:HapMap-YRI, CSHL-HAPMAP:HAPMAP-TSI, CSHL-HAPMAP:HAPMAP-GIH, CSHL-HAPMAP:HAPMAP-CHD, CSHL-HAPMAP:HAPMAP-CHB, ESP6500:European_American, ESP6500:African_American.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000372742 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000389060.4 IDO2-004

Summary