Transcript: ENST00000406856.1 TMPRSS6-002

Description

transmembrane protease, serine 6 [Source:HGNC Symbol;Acc:16517]

Gene Synonyms

FLJ30744, IRIDA

Location

Chromosome 22: 37,461,479-37,505,603 reverse strand.

About this transcript

This transcript has 19 exons, is annotated with 40 domains and features, is associated with 22905 variant alleles and maps to 578 oligo probes.

Gene

This transcript is a product of gene ENSG00000187045.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000346753.3	TMPRSS6-003	3194	811aa	ENSP00000334962.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13941	B0QYB6 Q8IU80	NM_153609.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000381792.2	TMPRSS6-201	3260	824aa	ENSP00000371211.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B0QYB6 Q8IU80	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000406856.1	TMPRSS6-002	3178	824aa	ENSP00000384964.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B0QYB6 Q8IU80	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000406725.1	TMPRSS6-001	3122	802aa	ENSP00000385453.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B0QYB6 Q8IU80	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000442782.2	TMPRSS6-004	1695	461aa	ENSP00000397691.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B0QYB6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000423761.1	TMPRSS6-005	526	141aa	ENSP00000400317.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B0QYB6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000429068.1	TMPRSS6-006	446	71aa	ENSP00000392433.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B0QYB3	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 19, Coding exons: 18, Transcript length: 3,178 bps, Translation length: 824 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8IU80

Version

ENST00000406856.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000318821 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000406856.1 TMPRSS6-002

Summary