Transcript: ENST00000487910.1 SAMD7-003

Description

sterile alpha motif domain containing 7 [Source:HGNC Symbol;Acc:25394]

Gene Synonyms

DKFZp686E1583

Location

About this transcript

This transcript has 9 exons, is annotated with 2 domains and features, is associated with 10185 variant alleles and maps to 314 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000428432.2	SAMD7-001	2399	446aa	ENSP00000391299.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3209	Q7Z3H4	NM_182610.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000335556.3	SAMD7-002	2376	446aa	ENSP00000334668.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3209	Q7Z3H4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000487910.1	SAMD7-003	1607	98aa	ENSP00000420460.1	Nonsense mediated decay		F8WDF1	-	-

Summary

Statistics

Exons: 9, Coding exons: 4, Transcript length: 1,607 bps, Translation length: 98 residues

Version

ENST00000487910.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000351961 (version 1)