Transcript: ENST00000593067.1 KRT16-003

Description

keratin 16 [Source:HGNC Symbol;Acc:6423]

Gene Synonyms

CK16, FNEPPK, K16, K1CP, KRT16A, NEPPK

Location

About this transcript

This transcript has 7 exons, is annotated with 12 domains and features, is associated with 1698 variant alleles and maps to 479 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000301653.4	KRT16-001	1644	473aa	ENSP00000301653.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11401	K7ENV3 K7ENW6 P08779	NM_005557.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000593067.1	KRT16-003	910	162aa	ENSP00000467124.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7ENW6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000590990.1	KRT16-004	499	48aa	ENSP00000467105.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7ENV3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000588319.1	KRT16-002	1000	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 4, Transcript length: 910 bps, Translation length: 162 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000593067.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000449088 (version 1)