Transcript: ENST00000498220.1 TMEM222-007

Description

transmembrane protein 222 [Source:HGNC Symbol;Acc:25363]

Gene Synonyms

C1orf160, DKFZP564D0478

Location

Chromosome 1: 27,648,791-27,662,036 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 5 domains and features, is associated with 5610 variant alleles and maps to 245 oligo probes.

Gene

This transcript is a product of gene ENSG00000186501.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000374076.4	TMEM222-001	1599	208aa	ENSP00000363189.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS297	Q8TDQ4 Q9H0R3	NM_032125.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000608611.1	TMEM222-010	1511	175aa	ENSP00000476439.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8TDQ4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000464813.1	TMEM222-008	1071	153aa	ENSP00000417853.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000498220.1	TMEM222-007	679	199aa	ENSP00000419292.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5SSC2	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000466759.1	TMEM222-006	368	95aa	ENSP00000419878.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000464720.1	TMEM222-004	1665	89aa	ENSP00000419528.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000486082.1	TMEM222-005	994	87aa	ENSP00000417720.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000478104.1	TMEM222-009	986	158aa	ENSP00000417603.1	Nonsense mediated decay		H0Y861	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000471456.1	TMEM222-002	2861	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000470223.1	TMEM222-003	2841	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 679 bps, Translation length: 199 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000498220.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000012815 (version 2)

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Transcript: ENST00000498220.1 TMEM222-007

Summary