Transcript: ENST00000527242.1 MUC6-003

Description

mucin 6, oligomeric mucus/gel-forming [Source:HGNC Symbol;Acc:7517]

Gene Synonyms

MUC-6

Location

About this transcript

This transcript has 3 exons, is annotated with 4 domains and features, is associated with 690 variant alleles and maps to 92 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000421673.2	MUC6-001	8006	2439aa	ENSP00000406861.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44513	H9XFB7 H9XFB8 H9XFB9 H9XFC0 Q6W3D1 Q6W4X9	NM_005961.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000532016.1	MUC6-004	656	219aa	ENSP00000433246.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000525923.1	MUC6-002	553	181aa	ENSP00000433790.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PJC5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000527242.1	MUC6-003	407	116aa	ENSP00000436903.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 407 bps, Translation length: 116 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000527242.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000382154 (version 1)