Transcript: ENST00000581487.1 CMTM4-005

Description

CKLF-like MARVEL transmembrane domain containing 4 [Source:HGNC Symbol;Acc:19175]

Gene Synonyms

CKLFSF4

Location

Chromosome 16: 66,648,653-66,655,678 reverse strand.

About this transcript

This transcript has 1 exon, is associated with 2637 variant alleles and maps to 321 oligo probes.

Gene

This transcript is a product of gene ENSG00000183723.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000330687.4	CMTM4-001	3414	234aa	ENSP00000333833.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10817	J3QRP2 Q8IZR5	NM_181521.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000394106.2	CMTM4-002	1187	208aa	ENSP00000377666.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42170	Q8IZR5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000563952.1	CMTM4-003	1023	179aa	ENSP00000456380.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8IZR5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000561680.1	CMTM4-004	618	140aa	ENSP00000464316.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QRP2	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000581487.1	CMTM4-005	7026	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 1, Coding exons: 0, Transcript length: 7,026 bps,

Version

ENST00000581487.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000441530 (version 1)

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Transcript: ENST00000581487.1 CMTM4-005

Summary