Transcript: ENST00000480666.1 COA5-005

Description

cytochrome c oxidase assembly factor 5 [Source:HGNC Symbol;Acc:33848]

Gene Synonyms

6330578E17Rik, C2orf64, FLJ27524, MGC52110, Pet191

Location

About this transcript

This transcript has 2 exons, is associated with 1823 variant alleles and maps to 256 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000328709.3	COA5-001	1754	74aa	ENSP00000330730.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33257	Q86WW8	NM_001008215.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409997.1	COA5-002	557	73aa	ENSP00000386934.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B9A057	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000483527.1	COA5-003	770	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000466848.1	COA5-004	481	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000480666.1	COA5-005	958	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 958 bps,

Version

ENST00000480666.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000329533 (version 1)