Transcript: ENST00000554823.1 SYNDIG1L-001

Description

synapse differentiation inducing 1-like [Source:HGNC Symbol;Acc:32388]

Gene Synonyms

CAPUCIN, DSPC1, IFITMD4, TMEM90A, capucin

Location

About this transcript

This transcript has 3 exons, is annotated with 9 domains and features, is associated with 2025 variant alleles and maps to 262 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000331628.3	SYNDIG1L-201	2607	238aa	ENSP00000331474.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41970	A6NDD5 G3V402	NM_001105579.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000554823.1	SYNDIG1L-001	2420	238aa	ENSP00000450439.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41970	A6NDD5 G3V402	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000554953.1	SYNDIG1L-002	488	80aa	ENSP00000451519.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V402	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 2,420 bps, Translation length: 238 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: A6NDD5

CCDS

This transcript is a member of the Human CCDS set: CCDS41970

Version

ENST00000554823.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000412341 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.