Transcript: ENST00000330298.6 CTNNA3-003

Description

catenin (cadherin-associated protein), alpha 3 [Source:HGNC Symbol;Acc:2511]

Gene Synonyms

MGC26194, VR22

Location

Chromosome 10: 69,281,600-69,425,410 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 11 domains and features, is associated with 62228 variant alleles and maps to 155 oligo probes.

Gene

This transcript is a product of gene ENSG00000183230.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000433211.2	CTNNA3-001	10675	895aa	ENSP00000389714.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7269	A6NKP0 Q5SW23 Q9UI47	NM_013266.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000373744.4	CTNNA3-201	2999	895aa	ENSP00000362849.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7269	A6NKP0 Q5SW23 Q9UI47	NM_001127384.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000545309.1	CTNNA3-202	1131	376aa	ENSP00000441444.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F2Z2R0 Q5SW23	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000330298.6	CTNNA3-003	696	193aa	ENSP00000330570.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5SW23	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000494580.1	CTNNA3-004	470	127aa	ENSP00000477144.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000373735.1	CTNNA3-005	1083	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 696 bps, Translation length: 193 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000330298.6

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000048284 (version 2)

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Transcript: ENST00000330298.6 CTNNA3-003

Summary