Transcript: ENST00000474640.1 RPL35A-009

Description

ribosomal protein L35a [Source:HGNC Symbol;Acc:10345]

Gene Synonyms

DBA5, L35A

Location

Chromosome 3: 197,680,434-197,682,722 forward strand.

About this transcript

This transcript has 2 exons, is associated with 1141 variant alleles and maps to 218 oligo probes.

Gene

This transcript is a product of gene ENSG00000182899.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000464167.1	RPL35A-001	1437	110aa	ENSP00000419117.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33930	C9K025 P18077	NM_000996.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000448864.1	RPL35A-002	549	110aa	ENSP00000393393.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33930	C9K025 P18077	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000442341.1	RPL35A-006	517	94aa	ENSP00000387688.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9K025	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000439255.1	RPL35A-008	564	57aa	ENSP00000410683.1	Nonsense mediated decay		F8WB72	-	-
ENST00000429437.1	RPL35A-007	442	55aa	ENSP00000398058.1	Nonsense mediated decay		F8WBS5	-	-
ENST00000329092.8	RPL35A-005	456	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000474640.1	RPL35A-009	687	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000485439.1	RPL35A-004	677	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000496582.1	RPL35A-003	579	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 687 bps,

Version

ENST00000474640.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000339796 (version 1)

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Transcript: ENST00000474640.1 RPL35A-009

Summary