Transcript: ENST00000483808.1 C3orf58-005

Description

chromosome 3 open reading frame 58 [Source:HGNC Symbol;Acc:28490]

Gene Synonyms

DIA1, GoPro49, HASF, MGC33365

Location

Chromosome 3: 143,691,719-143,704,997 forward strand.

About this transcript

This transcript has 2 exons, is associated with 6897 variant alleles and maps to 71 oligo probes.

Gene

This transcript is a product of gene ENSG00000181744.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000315691.3	C3orf58-001	4346	430aa	ENSP00000320081.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3130	B3KT85 E7ET39 Q8NDZ4	NM_173552.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000441925.2	C3orf58-003	3260	192aa	ENSP00000390796.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7ET39	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000495414.1	C3orf58-002	1876	221aa	ENSP00000417382.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46929	E7ET39 Q8NDZ4	NM_001134470.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000492452.2	C3orf58-006	730	213aa	ENSP00000419947.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JY09	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000493396.1	C3orf58-009	536	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000491798.1	C3orf58-004	416	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000483808.1	C3orf58-005	726	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 726 bps,

Version

ENST00000483808.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000355042 (version 1)

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000483808.1 C3orf58-005

Summary