Transcript: ENST00000578444.1 MRPS23-004

Description

mitochondrial ribosomal protein S23 [Source:HGNC Symbol;Acc:14509]

Gene Synonyms

CGI-138, HSPC329, MRP-S23

Location

About this transcript

This transcript has 4 exons, is annotated with 3 domains and features, is associated with 4773 variant alleles and maps to 139 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000313608.8	MRPS23-001	921	190aa	ENSP00000320184.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11598	Q9Y3D9	NM_016070.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000578444.1	MRPS23-004	580	152aa	ENSP00000463677.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QLR8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000579380.1	MRPS23-003	516	61aa	ENSP00000463481.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QLC1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000579768.1	MRPS23-002	706	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 580 bps, Translation length: 152 residues

Version

ENST00000578444.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000443302 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.