Transcript: ENST00000325404.1 SOX2-001

Description

SRY (sex determining region Y)-box 2 [Source:HGNC Symbol;Acc:11195]

Gene Synonyms

ANOP3, MCOPS3

Location

About this transcript

This transcript has 1 exon, is annotated with 11 domains and features, is associated with 2360 variant alleles and maps to 511 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000325404.1	SOX2-001	2500	317aa	ENSP00000323588.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3239	P48431	NM_003106.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000431565.2	SOX2-201	1318	317aa	ENSP00000439111.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3239	P48431	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 1, Coding exons: 1, Transcript length: 2,500 bps, Translation length: 317 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P48431

CCDS

This transcript is a member of the Human CCDS set: CCDS3239

Version

ENST00000325404.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript having same CDS:	OTTHUMT00000350419 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.