Transcript: ENST00000588210.1 CCDC43-002

Description

coiled-coil domain containing 43 [Source:HGNC Symbol;Acc:26472]

Gene Synonyms

FLJ31795

Location

Chromosome 17: 42,754,851-42,767,131 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 7 domains and features, is associated with 4579 variant alleles and maps to 275 oligo probes.

Gene

This transcript is a product of gene ENSG00000180329.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000315286.8	CCDC43-001	2082	224aa	ENSP00000323782.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45704	Q96MW1	NM_144609.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000588210.1	CCDC43-002	2067	227aa	ENSP00000467630.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q86WV7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000457422.2	CCDC43-003	2058	154aa	ENSP00000400845.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45705	Q96MW1	NM_001099225.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000588687.1	CCDC43-005	721	110aa	ENSP00000468079.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000592333.1	CCDC43-004	692	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 2,067 bps, Translation length: 227 residues

Version

ENST00000588210.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000457813 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000588210.1 CCDC43-002

Summary